PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN45540.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 273aa    MW: 30357.5 Da    PI: 9.105
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN45540.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08160200954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  KHN45540.1 160 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 200
                 699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.0E-14152210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-14155211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14157206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.3E-6161200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.26E-6174205No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MDVDIVKTSS NNNNMDVMAM MMQMEKFPEL FCDPFYTTSY QETDLLSSGS SSTTSASTLF  60
NNNSIVTTTP PPTTTLVDPT PSNVVQFSKI DDLFQHQHQQ QPMSQSLQPY PSEKKNSMAA  120
MREMIFRIAV MQPVHIDPES IKPPKRRNVK ISKDPQSVAA RHRRERISER IRILQRLVPG  180
GTKMDTASML DEAIHYVKFL KKQVQTLEQA GANTSPHSNT NSPNNHVVGA AGFPLGMSSN  240
YSNNSSVNYS SLLMKGGCQP CQMFGSTSKQ LLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150343e-98AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003524651.10.0PREDICTED: transcription factor HEC1-like
SwissprotQ9FHA71e-50HEC1_ARATH; Transcription factor HEC1
TrEMBLK7KP800.0K7KP80_SOYBN; Uncharacterized protein
TrEMBLA0A0B2SKG10.0A0A0B2SKG1_GLYSO; Transcription factor HEC1
STRINGGLYMA05G19920.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-43bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]